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Intron Name: Anas_platyrhynchos_platyrhynchos_1_10606086_10608685_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10606086 - 10608685

Intron Length:

2600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTGAG

5'SS Class:

major

3'SS Sequence:

TTATTCTCTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

AATTTCTTATTA

Flanking Amino Acid:

SEYELNDSAAYYLNDLDRLA

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

67.8

37.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

82.2

0.73

0.7

78.3

30.3

Minor 5ss

33.9

-1.8

3.2

41.8

40.2

Minor BPS

63.6

0.42

1.5

70.46

35.8

Associated Gene:

Gene:

GNAT3

Ensembl Gene ID:

ENSAPLG00000004836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034325

10587660 - 10615262

27603

ENSAPLT00000005024

10579496 - 10615262

35767