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Intron Name: Anas_platyrhynchos_platyrhynchos_1_10613635_10615038_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10613635 - 10615038

Intron Length:

1404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TCATCTCCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

TTGCCTCTTACT

Flanking Amino Acid:

HLNICFPEYNGLNTFEDAGN

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.2

40.6

Major BPS

71.4

0.53

1.2

63.4

Major PPT

66.4

0.37

0.9

60.1

36.5

Minor 5ss

36.8

-1.5

3.5

53.4

44.8

Minor BPS

0.08

74.37

42.2

Associated Gene:

Gene:

GNAT3

Ensembl Gene ID:

ENSAPLG00000004836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034325

10587660 - 10615262

27603

ENSAPLT00000005024

10579496 - 10615262

35767