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Intron Name: Anas_platyrhynchos_platyrhynchos_1_106149030_106149314_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106149030 - 106149314

Intron Length:

285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ACTATATTAACA

Flanking Amino Acid:

VNKTEKKHYDTPVHGSWGSW

Intron Amino Acid Position:

498

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

80.1

0.68

0.9

73.2

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

58.8

0.27

1.6

67.41

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008652

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009041

106146385 - 106225227

78843