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Intron Name: Anas_platyrhynchos_platyrhynchos_1_106190145_106190544_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

106190145 - 106190544

Intron Length:

400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTTAT

5'SS Class:

strong_major

3'SS Sequence:

AATAATTCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

ATTTGAATAATT

Flanking Amino Acid:

SCNVTPCPANAKSFRQEQCE

Intron Amino Acid Position:

558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

78.4

31.3

Major BPS

76.8

0.67

40.9

Major PPT

70.8

0.47

62.3

43.2

Minor 5ss

48.1

-0.2

2.5

63.2

43.8

Minor BPS

2.2

76.68

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008652

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008991

106184648 - 106225706

41059