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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1063430_1064080_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1063430 - 1064080

Intron Length:

651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAACA

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

TATAGTGTAATG

Flanking Amino Acid:

HLEKSAVLQEARIFNETPIN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

76.1

32.7

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

75.8

0.58

68.6

42.1

Minor 5ss

39.8

-1.1

2.8

Minor BPS

43.5

-0.6

2.3

52.57

42.8

Associated Gene:

Gene:

COPG2

Ensembl Gene ID:

ENSAPLG00000007961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008331

1061986 - 1078387

16402

ENSAPLT00000023829

1061986 - 1222013

160028