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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1064162_1065014_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1064162 - 1065014

Intron Length:

853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGATC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TATCTCTTACTC

Flanking Amino Acid:

LTKILYLLNQGEHFGTTEAT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

78.8

35.1

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

92.2

0.95

0.6

91.3

20.3

Minor 5ss

36.9

-1.5

3.3

51.7

45.1

Minor BPS

59.6

0.28

1.6

68.46

37.2

Associated Gene:

Gene:

COPG2

Ensembl Gene ID:

ENSAPLG00000007961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023829

1061986 - 1222013

160028

ENSAPLT00000008331

1061986 - 1078387

16402