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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1065087_1066164_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1065087 - 1066164

Intron Length:

1078

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAA

U12 Branch Point Sequence:

CTTTCTGCAATT

Flanking Amino Acid:

AMTRLFQSNDQTLRRMCYLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

33.2

Major BPS

63.2

0.33

1.1

55.1

42.1

Major PPT

87.8

0.85

0.7

83.5

31.6

Minor 5ss

36.4

-1.5

3.2

49.6

39.8

Minor BPS

50.4

0.09

2.2

75.4

42.3

Associated Gene:

Gene:

COPG2

Ensembl Gene ID:

ENSAPLG00000007961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023829

1061986 - 1222013

160028

ENSAPLT00000008331

1061986 - 1078387

16402