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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1066245_1067025_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1066245 - 1067025

Intron Length:

781

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGATT

5'SS Class:

major

3'SS Sequence:

TTGGTTATTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAC

U12 Branch Point Sequence:

CTTTGGTTATTT

Flanking Amino Acid:

ISEDVIIVTSSLTKDMTGKE

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

39.4

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

80.7

0.69

0.9

78.1

40.1

Minor 5ss

36.5

-1.5

3.6

47.3

Minor BPS

45.7

-0.2

2.6

70.91

46.7

Associated Gene:

Gene:

COPG2

Ensembl Gene ID:

ENSAPLG00000007961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023829

1061986 - 1222013

160028

ENSAPLT00000008331

1061986 - 1078387

16402