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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1067603_1068489_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1067603 - 1068489

Intron Length:

887

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGGCTTCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAA

U12 Branch Point Sequence:

GCAGTCTCAATT

Flanking Amino Acid:

VSSSALVSSLHMMKISYDVV

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

0.45

1.2

71.6

36.4

Major PPT

78.4

0.64

0.9

69.5

41.7

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

49.2

0.02

1.6

61.06

43.1

Associated Gene:

Gene:

COPG2

Ensembl Gene ID:

ENSAPLG00000007961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023829

1061986 - 1222013

160028

ENSAPLT00000008331

1061986 - 1078387

16402