Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_106766013_106767252_R

Intron Information:

Intron Rank:

132402

Intron Class:

major

Intron Phase:

Intron Coordinates:

106766013 - 106767252

Intron Length:

1240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGGGAA

5'SS Class:

major

3'SS Sequence:

TGTTTATAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGTTTATAAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

65.3

36.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

71.3

0.48

67.3

42.1

Minor 5ss

22.6

-3.2

3.2

19.8

37.9

Minor BPS

57.1

0.22

1.9

72.91

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018498

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028911

106765382 - 106799678

34297

ENSAPLT00000020643

106765382 - 106774519

9138