Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_106772640_106773742_R

Intron Information:

Intron Rank:

132404

Intron Class:

major

Intron Phase:

Intron Coordinates:

106772640 - 106773742

Intron Length:

1103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

CGTCTTATTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

ATTTGTACAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

84.1

26.5

Major BPS

77.3

0.68

81.5

Major PPT

79.3

0.66

0.9

72.7

36.3

Minor 5ss

30.9

-2.2

3.5

46.6

48.7

Minor BPS

45.6

-0.3

2.1

62.7

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018498

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022817

106765382 - 106774519

9138

ENSAPLT00000020643

106765382 - 106774519

9138