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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107163823_107164518_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

107163823 - 107164518

Intron Length:

696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ATTTCTCTCACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

1.1

84.4

27.7

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

82.5

0.73

0.8

76.8

31.2

Minor 5ss

31.4

-2.1

2.4

41.4

Minor BPS

55.5

0.17

2.1

74.29

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033647

107161400 - 107164727

3328

ENSAPLT00000032600

107161400 - 107167498

6099