Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_107194740_107197148_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

107194740 - 107197148

Intron Length:

2409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGGATCCT

5'SS Class:

weak_major

3'SS Sequence:

CTTTCTCGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCTT

U12 Branch Point Sequence:

TTTCTCTTTCTC

Flanking Amino Acid:

QAWGPQHKKDEAAGMASREE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.7

0.23

1.1

57.7

41.1

Major BPS

37.5

-0.7

4.3

79.6

35.6

Major PPT

73.7

0.53

0.8

73.4

31.6

Minor 5ss

31.8

-2.1

3.4

45.6

42.8

Minor BPS

41.6

-0.6

3.5

67.25

38.7

Associated Gene:

Gene:

RWDD2B

Ensembl Gene ID:

ENSAPLG00000004842

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004981

107192374 - 107197199

4826