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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107199843_107200522_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

107199843 - 107200522

Intron Length:

680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATCTCTT

5'SS Class:

weak_major

3'SS Sequence:

ATCAACATTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

TGGTTATCAACA

Flanking Amino Acid:

IWLCLKCGHRGCGRNSPEQH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.38

1.2

65.3

Major BPS

0.72

80.3

31.7

Major PPT

63.5

0.3

55.2

39.2

Minor 5ss

54.8

0.16

2.5

67.6

43.5

Minor BPS

52.2

0.07

1.8

65.44

40.6

Associated Gene:

Gene:

USP16

Ensembl Gene ID:

ENSAPLG00000004850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005009

107197896 - 107215372

17477