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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107204809_107205766_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107204809 - 107205766

Intron Length:

958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTAG

5'SS Class:

major

3'SS Sequence:

TTTTCTTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACCAAT

U12 Branch Point Sequence:

TTTTCTTCTACA

Flanking Amino Acid:

NTCFFNAVMQNLSQTPVLRE

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

60.1

41.3

Major BPS

64.1

0.35

1.2

33.2

Major PPT

92.7

0.96

0.6

88.1

21.9

Minor 5ss

34.4

-1.8

3.5

49.3

Minor BPS

63.5

0.42

1.9

79.64

36.2

Associated Gene:

Gene:

USP16

Ensembl Gene ID:

ENSAPLG00000004850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005009

107197896 - 107215372

17477