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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107206591_107206967_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107206591 - 107206967

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

CTTCAATTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTTATC

Flanking Amino Acid:

PKELFAQVCKKAIRFKGYQQ

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.1

26.4

Major BPS

100

1.24

0.5

100

Major PPT

71.7

0.49

66.1

38.4

Minor 5ss

36.6

-1.5

2.9

46.1

36.1

Minor BPS

64.4

0.44

1.9

34.8

Associated Gene:

Gene:

USP16

Ensembl Gene ID:

ENSAPLG00000004850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005009

107197896 - 107215372

17477