Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_107209912_107210712_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107209912 - 107210712

Intron Length:

801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TGTTCATTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GTTCATTTAAAG

Flanking Amino Acid:

STIMCEECKTVSLVHESFLD

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.3

32.8

Major BPS

81.8

0.79

1.1

34.5

Major PPT

71.9

0.49

1.1

71.6

37.6

Minor 5ss

37.2

-1.4

2.8

47.9

41.8

Minor BPS

53.1

-0

1.7

60.29

40.9

Associated Gene:

Gene:

USP16

Ensembl Gene ID:

ENSAPLG00000004850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005009

107197896 - 107215372

17477