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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107211727_107212147_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107211727 - 107212147

Intron Length:

421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTTTT

5'SS Class:

major

3'SS Sequence:

TACCAATTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATATGCTTATAC

Flanking Amino Acid:

TKKLAKKQAKSQRRLQKLQG

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.2

79.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.2

0.52

0.9

65.8

39.3

Minor 5ss

41.1

-1

3.1

58.6

Minor BPS

48.7

-0.1

2.1

63.09

Associated Gene:

Gene:

USP16

Ensembl Gene ID:

ENSAPLG00000004850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005009

107197896 - 107215372

17477