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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107213617_107214592_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107213617 - 107214592

Intron Length:

976

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAAAC

5'SS Class:

major

3'SS Sequence:

ATGTCTGTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

CTCTCCTTCATG

Flanking Amino Acid:

LTLHLKRFQQAGFNLRKVNR

Intron Amino Acid Position:

698

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

75.1

35.1

Major BPS

0.52

1.1

77.7

35.3

Major PPT

65.3

0.35

1.1

68.2

Minor 5ss

39.3

-1.2

2.9

51.9

44.9

Minor BPS

58.8

0.13

1.9

62.41

46.2

Associated Gene:

Gene:

USP16

Ensembl Gene ID:

ENSAPLG00000004850

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005009

107197896 - 107215372

17477