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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107220732_107221877_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107220732 - 107221877

Intron Length:

1146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

GGTTTGTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAA

U12 Branch Point Sequence:

TTCATTTTAGTG

Flanking Amino Acid:

GVNTFKVLTRDKRLVPGGGA

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

77.5

32.9

Major BPS

69.4

0.48

71.6

33.8

Major PPT

79.6

0.67

72.9

42.2

Minor 5ss

30.1

-2.3

2.6

28.4

Minor BPS

49.3

-0.1

1.6

54.87

41.4

Associated Gene:

Gene:

CCT8

Ensembl Gene ID:

ENSAPLG00000004961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005169

107218508 - 107228171

9664