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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1072217_1073069_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1072217 - 1073069

Intron Length:

853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGTGGCAT

5'SS Class:

major

3'SS Sequence:

TGTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCAAAT

U12 Branch Point Sequence:

CTGTGCCTAACG

Flanking Amino Acid:

FVSEISDEFKVVVVQAISAL

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

67.4

39.3

Major BPS

53.3

0.08

1.1

Major PPT

86.1

0.81

0.8

80.6

Minor 5ss

33.1

-1.9

3.3

46.2

49.1

Minor BPS

49.1

-0.2

2.2

59.63

47.9

Associated Gene:

Gene:

COPG2

Ensembl Gene ID:

ENSAPLG00000007961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023829

1061986 - 1222013

160028

ENSAPLT00000008331

1061986 - 1078387

16402