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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107226603_107228111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107226603 - 107228111

Intron Length:

1509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TAATTCTGACCA

Flanking Amino Acid:

FAQMLKEGAKHYSGLEEAVY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

72.5

38.6

Major BPS

81.6

0.78

0.8

24.9

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

31.5

-2.1

3.2

40.8

45.2

Minor BPS

54.2

0.13

1.7

66.14

39.8

Associated Gene:

Gene:

CCT8

Ensembl Gene ID:

ENSAPLG00000004961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005169

107218508 - 107228171

9664