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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107295377_107297173_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

107295377 - 107297173

Intron Length:

1797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATGACT

5'SS Class:

major

3'SS Sequence:

TCTTAATGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GTTTTCTTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

70.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

65.5

0.35

1.1

43.2

Minor 5ss

35.1

-1.7

3.2

47.1

42.5

Minor BPS

77.4

0.72

1.2

75.64

36.3

Associated Gene:

Gene:

MAP3K7CL

Ensembl Gene ID:

ENSAPLG00000004718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004861

107295316 - 107324319

29004