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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107306391_107306947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107306391 - 107306947

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATGGTC

5'SS Class:

strong_major

3'SS Sequence:

GTGTACCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGGCTTTTAATG

Flanking Amino Acid:

VLRCSHHVYVDDDAPENSFP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

73.2

36.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.8

0.47

0.9

66.9

40.2

Minor 5ss

33.8

-1.8

3.7

49.8

46.8

Minor BPS

57.7

0.1

1.3

56.65

39.5

Associated Gene:

Gene:

MAP3K7CL

Ensembl Gene ID:

ENSAPLG00000004718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017688

107306276 - 107324319

18044