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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107307010_107316447_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107307010 - 107316447

Intron Length:

9438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTTA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTCATAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

CTGTTCATAAAG

Flanking Amino Acid:

AFPELDQQLQPLPPCHDSTE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

Major BPS

84.8

0.86

85.7

34.9

Major PPT

67.1

0.38

1.1

67.6

37.3

Minor 5ss

43.8

-0.7

2.8

58.6

45.8

Minor BPS

49.7

-0.1

1.8

56.94

44.4

Associated Gene:

Gene:

MAP3K7CL

Ensembl Gene ID:

ENSAPLG00000004718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004864

107294586 - 107324319

29734

ENSAPLT00000004861

107295316 - 107324319

29004

ENSAPLT00000042979

107294883 - 107324417

29535

ENSAPLT00000021958

107297174 - 107324417

27244

ENSAPLT00000017688

107306276 - 107324319

18044