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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1073166_1073559_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1073166 - 1073559

Intron Length:

394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAGGTTTG

5'SS Class:

major

3'SS Sequence:

TTGCTCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGGTGAG

U12 Branch Point Sequence:

TGCTGGGTGAGT

Flanking Amino Acid:

TFLSNMLRDDGGFEYKRAIV

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

71.7

40.8

Major BPS

39.9

-0.6

1.7

28.5

45.1

Major PPT

80.4

0.68

0.8

72.9

37.4

Minor 5ss

44.8

-0.6

3.1

61.8

43.3

Minor BPS

34.4

-1.1

2.8

54.9

47.4

Associated Gene:

Gene:

COPG2

Ensembl Gene ID:

ENSAPLG00000007961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023829

1061986 - 1222013

160028

ENSAPLT00000008331

1061986 - 1078387

16402