Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_107374365_107379201_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107374365 - 107379201

Intron Length:

4837

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

GTATGCTAAAAA

Flanking Amino Acid:

QNLESEIEKLQNEKENLLKE

Intron Amino Acid Position:

614

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

81.5

31.6

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

92.1

0.95

0.6

88.1

21.8

Minor 5ss

45.5

-0.5

2.5

56.3

43.3

Minor BPS

-0.1

2.1

62.34

43.4

Associated Gene:

Gene:

BACH1

Ensembl Gene ID:

ENSAPLG00000004662

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032032

107356441 - 107379663

23223

ENSAPLT00000021142

107356441 - 107381327

24887

ENSAPLT00000017420

107356441 - 107380044

23604

ENSAPLT00000004786

107356441 - 107380044

23604