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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1073804_1074761_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1073804 - 1074761

Intron Length:

958

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

AGCGCTTGCACC

Flanking Amino Acid:

VVLENEAVRAAAVSALAKFG

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

72.8

34.4

Major BPS

0.72

38.9

Major PPT

92.3

0.95

0.6

85.1

29.7

Minor 5ss

34.3

-1.8

2.8

37.6

42.2

Minor BPS

43.7

-0.5

1.9

49.75

40.9

Associated Gene:

Gene:

COPG2

Ensembl Gene ID:

ENSAPLG00000007961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023829

1061986 - 1222013

160028

ENSAPLT00000008331

1061986 - 1078387

16402