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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107482322_107484179_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

107482322 - 107484179

Intron Length:

1858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

AATGATGATTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GTTTTCTTAATG

Flanking Amino Acid:

EYYHYFFTTLDLFALDLEPY

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.9

31.6

Major BPS

0.92

0.9

86.2

29.1

Major PPT

56.7

0.15

1.1

52.2

46.2

Minor 5ss

33.9

-1.8

2.9

40.8

39.5

Minor BPS

77.4

0.72

1.2

75.64

36.3

Associated Gene:

Gene:

GRIK1

Ensembl Gene ID:

ENSAPLG00000003999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045773

107426080 - 107594296

168217

ENSAPLT00000022994

107426080 - 107594296

168217

ENSAPLT00000020678

107426080 - 107594296

168217

ENSAPLT00000004177

107426080 - 107594296

168217

ENSAPLT00000047234

107426080 - 107594296

168217