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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1074838_1075724_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1074838 - 1075724

Intron Length:

887

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCAAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

TGTTCCCCAAAC

Flanking Amino Acid:

LLPSILVLLQRCMMDSDDEV

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

63.6

0.31

56.5

37.7

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

52.5

0.06

70.26

40.2

Associated Gene:

Gene:

COPG2

Ensembl Gene ID:

ENSAPLG00000007961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023829

1061986 - 1222013

160028

ENSAPLT00000008331

1061986 - 1078387

16402