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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107501311_107593242_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107501311 - 107593242

Intron Length:

91932

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACCAG

U12 Branch Point Sequence:

CCTCTCTCCACA

Flanking Amino Acid:

PRSGQQVLRIACDQLALGVA

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

46.7

-0.2

1.7

60.8

45.4

Major PPT

77.5

0.62

0.7

71.6

26.5

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

46.2

-0.3

56.1

43.3

Associated Gene:

Gene:

GRIK1

Ensembl Gene ID:

ENSAPLG00000003999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045773

107426080 - 107594296

168217