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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107503923_107593242_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107503923 - 107593242

Intron Length:

89320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTATCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTCATTTATCT

Flanking Amino Acid:

PRSGQQVLRIGGIFETVENE

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

71.7

0.49

66.6

38.6

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

54.6

0.22

1.8

74.15

42.7

Associated Gene:

Gene:

GRIK1

Ensembl Gene ID:

ENSAPLG00000003999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004177

107426080 - 107594296

168217

ENSAPLT00000047234

107426080 - 107594296

168217

ENSAPLT00000029805

107426080 - 107594296

168217

ENSAPLT00000022994

107426080 - 107594296

168217

ENSAPLT00000020678

107426080 - 107594296

168217