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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1075829_1076677_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1075829 - 1076677

Intron Length:

849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTCAGTGAT

5'SS Class:

major

3'SS Sequence:

TTCTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAA

U12 Branch Point Sequence:

TAAAACTGAAAT

Flanking Amino Acid:

IALNAAYIFNGLTVSVPGME

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.3

72.7

38.8

Major BPS

70.2

0.5

71.6

30.1

Major PPT

85.8

0.81

0.8

80.4

31.6

Minor 5ss

30.3

-2.3

3.2

41.8

44.7

Minor BPS

48.9

-0

1.8

67.17

Associated Gene:

Gene:

COPG2

Ensembl Gene ID:

ENSAPLG00000007961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008331

1061986 - 1078387

16402

ENSAPLT00000023829

1061986 - 1222013

160028