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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107742437_107744570_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107742437 - 107744570

Intron Length:

2134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCG

5'SS Class:

strong_major

3'SS Sequence:

GTTAATCTCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTCACGTTAATC

Flanking Amino Acid:

HTKVPKVLVKAKTDTAFKAF

Intron Amino Acid Position:

1174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

72.5

37.3

Major BPS

84.7

0.86

74.3

40.7

Major PPT

67.8

0.4

0.9

58.8

42.6

Minor 5ss

30.7

-2.2

3.3

39.2

46.2

Minor BPS

0.23

2.1

70.67

41.2

Associated Gene:

Gene:

TIAM1

Ensembl Gene ID:

ENSAPLG00000003481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033979

107737037 - 107850332

113296

ENSAPLT00000027579

107737037 - 107851905

114869

ENSAPLT00000003593

107737037 - 107838759

101723

ENSAPLT00000047279

107737037 - 107850486

113450