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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107769692_107774130_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

107769692 - 107774130

Intron Length:

4439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

GGGATATCCCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TGCTGTCTAACC

Flanking Amino Acid:

EKSDASSDIYGFSLSSVEEE

Intron Amino Acid Position:

873

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

27.9

Major BPS

0.65

1.1

77.4

37.3

Major PPT

54.4

0.1

42.5

Minor 5ss

44.9

-0.5

2.8

58.5

40.5

Minor BPS

48.9

-0.1

2.1

63.35

42.4

Associated Gene:

Gene:

TIAM1

Ensembl Gene ID:

ENSAPLG00000003481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027579

107737037 - 107851905

114869

ENSAPLT00000003593

107737037 - 107838759

101723

ENSAPLT00000047279

107737037 - 107850486

113450

ENSAPLT00000033979

107737037 - 107850332

113296