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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1077723_1077845_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1077723 - 1077845

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGAGAG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

TTCTCCTTTCTG

Flanking Amino Acid:

VAPSRQDIFQEQLAAIPEFK

Intron Amino Acid Position:

613

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.2

39.8

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

80.6

0.69

0.9

76.1

32.4

Minor 5ss

28.7

-2.4

3.4

37.6

47.2

Minor BPS

42.9

-0.7

3.6

62.9

45.4

Associated Gene:

Gene:

COPG2

Ensembl Gene ID:

ENSAPLG00000007961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008331

1061986 - 1078387

16402