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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107785247_107787176_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107785247 - 107787176

Intron Length:

1930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CGTTTTAAAACA

Flanking Amino Acid:

KKQGRPSINQVFGEGVDSVK

Intron Amino Acid Position:

729

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.4

0.64

0.8

76.2

32.4

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

47.2

-0.2

1.9

59.92

40.4

Associated Gene:

Gene:

TIAM1

Ensembl Gene ID:

ENSAPLG00000003481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027579

107737037 - 107851905

114869

ENSAPLT00000003593

107737037 - 107838759

101723

ENSAPLT00000047279

107737037 - 107850486

113450

ENSAPLT00000033979

107737037 - 107850332

113296