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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107882859_107890611_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107882859 - 107890611

Intron Length:

7753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

CTTCTTCTAACT

Flanking Amino Acid:

APVTQAIPLLGTQGVAPPPP

Intron Amino Acid Position:

813

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

29.6

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

84.4

0.77

0.7

76.4

32.2

Minor 5ss

40.6

-1

2.7

47.5

42.3

Minor BPS

58.7

0.35

1.7

77.41

39.2

Associated Gene:

Gene:

SCAF4

Ensembl Gene ID:

ENSAPLG00000002509

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002619

107881662 - 107926653

44992

ENSAPLT00000037883

107881662 - 107926653

44992