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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107891280_107896261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107891280 - 107896261

Intron Length:

4982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAG

U12 Branch Point Sequence:

CTTGAGGTAACG

Flanking Amino Acid:

PAPITVPPPQVPPHPSGPPV

Intron Amino Acid Position:

669

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

84.1

26.5

Major BPS

59.9

0.25

1.6

59.3

47.1

Major PPT

79.2

0.66

0.7

78.2

30.7

Minor 5ss

30.9

-2.2

3.5

46.6

48.7

Minor BPS

39.5

-0.9

2.7

51.43

48.7

Associated Gene:

Gene:

SCAF4

Ensembl Gene ID:

ENSAPLG00000002509

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037883

107881662 - 107926653

44992

ENSAPLT00000002619

107881662 - 107926653

44992