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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107898866_107899891_R

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

107898866 - 107899891

Intron Length:

1026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

AAAATACAAACAG|A

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTTCCTTAAAA

Flanking Amino Acid:

EEFGPIESINMIPPRGCAYI

Intron Amino Acid Position:

527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

88.7

0.96

0.8

36.5

Major PPT

49.8

-0

1.1

41.9

41.4

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

1.19

1.1

93.09

25.3

Associated Gene:

Gene:

SCAF4

Ensembl Gene ID:

ENSAPLG00000002509

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037883

107881662 - 107926653

44992

ENSAPLT00000002619

107881662 - 107926653

44992