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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107902392_107903003_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

107902392 - 107903003

Intron Length:

612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTAG

5'SS Class:

strong_major

3'SS Sequence:

TGGTTTAAACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AATTTTTTAAAA

Flanking Amino Acid:

SRKSRSRSASRSPKRRRSRS

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.3

33.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

59.4

0.21

1.1

53.5

Minor 5ss

38.9

-1.2

2.9

48.7

47.5

Minor BPS

67.4

0.54

1.3

71.85

33.4

Associated Gene:

Gene:

SCAF4

Ensembl Gene ID:

ENSAPLG00000002509

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037883

107881662 - 107926653

44992

ENSAPLT00000002619

107881662 - 107926653

44992