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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107904875_107906618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107904875 - 107906618

Intron Length:

1744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTACTATTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAC

U12 Branch Point Sequence:

GTCTACTGACTT

Flanking Amino Acid:

APSPSVSQPAFGFPGEGIQQ

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

82.6

30.5

Major BPS

0.4

1.1

57.8

38.6

Major PPT

79.8

0.67

0.8

78.2

Minor 5ss

48.7

-0.1

2.8

73.2

37.2

Minor BPS

47.8

-0

1.9

66.5

44.2

Associated Gene:

Gene:

SCAF4

Ensembl Gene ID:

ENSAPLG00000002509

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037883

107881662 - 107926653

44992