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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107906720_107907031_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107906720 - 107907031

Intron Length:

312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TAATTCCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAAAAT

U12 Branch Point Sequence:

CTCACTGTAATT

Flanking Amino Acid:

PPEQKTSFDKKLLDRFDYDD

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

90.7

21.1

Major BPS

61.8

0.29

1.1

67.7

34.6

Major PPT

77.2

0.61

0.8

74.8

35.6

Minor 5ss

47.8

-0.2

2.8

67.5

37.3

Minor BPS

49.3

0.02

2.1

67.54

44.3

Associated Gene:

Gene:

SCAF4

Ensembl Gene ID:

ENSAPLG00000002509

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037883

107881662 - 107926653

44992

ENSAPLT00000002619

107881662 - 107926653

44992