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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107910515_107912512_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107910515 - 107912512

Intron Length:

1998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGCTA

5'SS Class:

major

3'SS Sequence:

TTTGTTTCGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAG

U12 Branch Point Sequence:

TTTGTTTCGACA

Flanking Amino Acid:

YLYLCPSEDKSKIVRVLNLW

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

63.1

42.9

Major BPS

64.7

0.37

1.5

63.7

43.9

Major PPT

79.5

0.66

76.6

37.7

Minor 5ss

32.6

-2

3.7

47.1

48.3

Minor BPS

54.2

0.13

1.6

69.5

37.2

Associated Gene:

Gene:

SCAF4

Ensembl Gene ID:

ENSAPLG00000002509

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037883

107881662 - 107926653

44992

ENSAPLT00000002619

107881662 - 107926653

44992