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Intron Name: Anas_platyrhynchos_platyrhynchos_1_107993280_107997714_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107993280 - 107997714

Intron Length:

4435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTGT

5'SS Class:

major

3'SS Sequence:

CCTCTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGCAAT

U12 Branch Point Sequence:

GTGCAAGCAATG

Flanking Amino Acid:

RAPPNVTYPNRIHLEDLSQS

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.4

43.3

Major BPS

48.1

-0.1

1.3

54.5

39.1

Major PPT

84.9

0.79

0.7

25.4

Minor 5ss

37.5

-1.4

3.5

56.6

47.6

Minor BPS

33.6

-1.3

2.1

36.26

38.9

Associated Gene:

Gene:

HUNK

Ensembl Gene ID:

ENSAPLG00000002063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002104

107952157 - 108006909

54753