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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108131028_108131637_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108131028 - 108131637

Intron Length:

610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTCTCTAATT

Flanking Amino Acid:

AMTEEEVNKKAVCVFLTSVY

Intron Amino Acid Position:

2213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.1

78.8

38.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

88.2

0.86

0.6

84.1

24.1

Minor 5ss

47.5

-0.2

2.6

67.8

Minor BPS

0.86

1.6

92.5

29.7

Associated Gene:

Gene:

URB1

Ensembl Gene ID:

ENSAPLG00000012791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013351

108130822 - 108175484

44663

ENSAPLT00000042001

108130822 - 108171940

41119