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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108134954_108135697_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108134954 - 108135697

Intron Length:

744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATTTCGTGAAAG

Flanking Amino Acid:

NSPLCDEVSQNHILEILQNA

Intron Amino Acid Position:

1840

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.1

1.04

0.7

89.9

22.1

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

89.9

0.9

0.7

88.4

28.7

Minor 5ss

37.1

-1.5

48.8

46.9

Minor BPS

49.2

-0.1

2.3

64.32

Associated Gene:

Gene:

URB1

Ensembl Gene ID:

ENSAPLG00000012791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042001

108130822 - 108171940

41119

ENSAPLT00000013351

108130822 - 108175484

44663