Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_108135842_108136424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108135842 - 108136424

Intron Length:

583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGCAA

5'SS Class:

major

3'SS Sequence:

TTGTGGCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACTATTTTTATT

Flanking Amino Acid:

FQLFYSFDFEHKIEREWVLR

Intron Amino Acid Position:

1792

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

67.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

75.8

0.58

65.9

45.3

Minor 5ss

30.1

-2.3

3.2

38.5

46.5

Minor BPS

49.7

0.06

1.6

65.7

Associated Gene:

Gene:

URB1

Ensembl Gene ID:

ENSAPLG00000012791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013351

108130822 - 108175484

44663

ENSAPLT00000042001

108130822 - 108171940

41119