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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108138250_108142181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108138250 - 108142181

Intron Length:

3932

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTGA

5'SS Class:

major

3'SS Sequence:

TCTTCTCCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

TCTTCTCCTACA

Flanking Amino Acid:

LQLFSELTRPECVVACHKFV

Intron Amino Acid Position:

1665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

38.3

Major BPS

0.42

1.1

57.3

41.7

Major PPT

86.2

0.81

0.7

80.5

Minor 5ss

35.4

-1.7

3.3

47.1

48.3

Minor BPS

46.6

-0.2

2.1

64.22

Associated Gene:

Gene:

URB1

Ensembl Gene ID:

ENSAPLG00000012791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013351

108130822 - 108175484

44663

ENSAPLT00000042001

108130822 - 108171940

41119