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Intron Name: Anas_platyrhynchos_platyrhynchos_1_108146491_108147221_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108146491 - 108147221

Intron Length:

731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTTCTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

TGTTCTGTGATC

Flanking Amino Acid:

DWYNLVKTGLKYRYRDEAFL

Intron Amino Acid Position:

1450

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

26.3

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

74.6

0.55

75.1

33.8

Minor 5ss

36.1

-1.6

3.3

49.4

41.3

Minor BPS

54.4

0.12

69.72

36.4

Associated Gene:

Gene:

URB1

Ensembl Gene ID:

ENSAPLG00000012791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013351

108130822 - 108175484

44663

ENSAPLT00000042001

108130822 - 108171940

41119